Version: 4.0.0


Types of data loaded#

proteins, genes, pathways

How to download the data#

How to load the data into your mine#

project XML example

<source name="reactome" type="reactome">
<property name="" location="/data/reactome" />
<property name="reactome.organisms" value="9606 10090" />

This source contains a task to copy the pathways from the proteins to the related genes. To include this, add this to the post-processing section of your project XML file:

<post-process name="do-sources" />

See Post processing for more information on post-processing.