This is documentation for InterMine Server Documentation 4.0.0, which is no longer actively maintained.

For up-to-date documentation, see the latest version (5.0.0).

Version: 4.0.0

OrthoDB

Data

ftp://cegg.unige.ch/OrthoDB6/OrthoDB6_ALL_FUNGI_tabtext.gz, ftp://cegg.unige.ch/OrthoDB6/OrthoDB6_ALL_METAZOA_tabtext.gz

Unzip the files and put them in the same directory.

Project XML

<source name="orthodb" type="orthodb">
  <property name="src.data.dir" location="/DATA/orthodb"/>
  <property name="orthodb.organisms" value="7227 9606 10090 10116 7955 6239 4932"/>
</source>

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