Publications & Citing InterMine

InterMine citation

Citing Us

Publications

Publications by the InterMine Team and Community

• HumanMine: advanced data searching, analysis and cross-species comparison Rachel Lyne et al. May 2022
• Encompassing new use cases - level 3.0 of the HUPO-PSI format for molecular interactions M. Sivade Dumousseau et al. Apr 11, 2018
• JAMI: a Java library for molecular interactions and data interoperability M. Sivade Dumousseau et al. Apr 11, 2018
• ThaleMine: A warehouse for Arabidopsis data integration and discovery Vivek Krishnakumar et al. 2017
• Cross-organism analysis using InterMine Rachel Lyne et al. Aug 2015
• toxoMine: an integrated omics data warehouse for Toxoplasma gondii systems biology research David B. Rhee et al. 2015
• InterMine: extensive web services for modern biology Alex Kalderimis et al. Jul 2014
• esyN: network building, sharing and publishing Daniel M. Bean et al. 2014
• InterMOD: integrated data and tools for the unification of model organism research Julie Sullivan et al. 2013
• InterMine: a flexible data warehouse system for the integration and analysis of heterogeneous biological data Richard N. Smith et al. Dec 01, 2012
• modMine: flexible access to modENCODE data Sergio Contrino et al. Jan 2012
• YeastMine--an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit Rama Balakrishnan et al. 2012
• FlyMine: an integrated database for Drosophila and Anopheles genomics Rachel Lyne et al. 2007

Citations and Publications about Community-run InterMines

• Clin.iobio: A Collaborative Diagnostic Workflow to Enable Team-Based Precision Genomics Alistair Ward et al. 2022-01-08
• Hymenoptera Genome Database: new genomes and annotation datasets for improved go enrichment and orthologue analyses Amy T. Walsh et al. 2022-01-07
• Hymenoptera Genome Database: new genomes and annotation datasets for improved go enrichment and orthologue analyses Amy T. Walsh et al. 2022-01-07
• Genome-wide approaches delineate the additive, epistatic, and pleiotropic nature of variants controlling fatty acid composition in peanut (Arachis hypogaea L.) Paul I. Otyama et al. 2022-01-04
• Gene family evolution underlies cell-type diversification in the hypothalamus of teleosts Maxwell E. R. Shafer et al. 2022-01
• Doing Genetic and Genomic Biology Using the Legume Information System and Associated Resources Sven Redsun et al. 2022
• Gramene: A Resource for Comparative Analysis of Plants Genomes and Pathways Marcela Karey Tello-Ruiz et al. 2022
• Doing Genetic and Genomic Biology Using the Legume Information System and Associated Resources Sven Redsun et al. 2022
• Mouse Genome Informatics (MGI): latest news from MGD and GXD Martin Ringwald et al. 2021-10-26
• Translating synthetic natural language to database queries with a polyglot deep learning framework Adrián Bazaga et al. 2021-09-16
• Two isoforms of the essential C. elegans Argonaute CSR-1 differentially regulate sperm and oocyte fertility Amanda G. Charlesworth et al. 2021-09-07
• Two isoforms of the essential C. elegans Argonaute CSR-1 differentially regulate sperm and oocyte fertility Amanda G. Charlesworth et al. 2021-09-07
• A PostgreSQL Tripal solution for large-scale genotypic and phenotypic data Lacey-Anne Sanderson et al. 2021-08-14
• Planarian Anatomy Ontology: a resource to connect data within and across experimental platforms Stephanie H. Nowotarski et al. 2021-08-01
• Planarian Anatomy Ontology: a resource to connect data within and across experimental platforms Stephanie H. Nowotarski et al. 2021-08-01
• Plasma Proteomics of Renal Function: A Trans-ethnic Meta-analysis and Mendelian Randomization Study Pamela Matías-García et al. 2021-06-16
• The GEnetic Syntax Score: a genetic risk assessment implementation tool grading the complexity of coronary artery disease-rationale and design of the GESS study Ioannis S. Vizirianakis et al. 2021-06-08
• The GEnetic Syntax Score: a genetic risk assessment implementation tool grading the complexity of coronary artery disease-rationale and design of the GESS study Ioannis S. Vizirianakis et al. 2021-06-08
• Advantages of using graph databases to explore chromatin conformation capture experiments Daniele D'Agostino et al. 2021-04-26
• Exposure to maternal high-fat diet induces extensive changes in the brain of adult offspring Darren J. Fernandes et al. 2021-03-02
• DDK regulates replication initiation by controlling the multiplicity of Cdc45-GINS binding to Mcm2-7 Lorraine De Jesús-Kim et al. 2021-02-22
• Signalling pathways and mechanistic cues highlighted by transcriptomic analysis of primordial, primary, and secondary ovarian follicles in domestic cat Shauna Kehoe et al. 2021-01-29
• The human O-GlcNAcome database and meta-analysis Eugenia Wulff-Fuentes et al. 2021-01-21
• Elucidating the network features and evolutionary attributes of intra- and interspecific protein-protein interactions between human and pathogenic bacteria Debarun Acharya et al. 2021-01-08
• The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals Frederic B. Bastian et al. 2021-01-08