Package org.intermine.dataloader

Class SourcePriorityComparator

java.lang.Object

org.intermine.dataloader.SourcePriorityComparator

All Implemented Interfaces:

java.util.Comparator<InterMineObject>

public class SourcePriorityComparator
extends java.lang.Object
implements java.util.Comparator<InterMineObject>

Comparator, that compares two InterMineObjects, with reference to a particular FieldDescriptor for priority.

Author:

Matthew Wakeling, Andrew Varley

Constructor Summary

Constructors

Constructor	Description
SourcePriorityComparator(DataTracker dataTracker, java.lang.Class<? extends InterMineObject> clazz, java.lang.String fieldName, Source def, InterMineObject defObj, IntPresentSet dbIdsStored, IntegrationWriterAbstractImpl iw, Source source, Source skelSource, PriorityConfig priorityConfig)	Constructs a new Comparator for comparing objects for priority for a given field.

Method Summary

Modifier and Type	Method	Description
int	compare(InterMineObject o1, InterMineObject o2)	Compares two objects.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface java.util.Comparator

equals, reversed, thenComparing, thenComparing, thenComparing, thenComparingDouble, thenComparingInt, thenComparingLong

Constructor Detail

SourcePriorityComparator

public SourcePriorityComparator(DataTracker dataTracker,
                                java.lang.Class<? extends InterMineObject> clazz,
                                java.lang.String fieldName,
                                Source def,
                                InterMineObject defObj,
                                IntPresentSet dbIdsStored,
                                IntegrationWriterAbstractImpl iw,
                                Source source,
                                Source skelSource,
                                PriorityConfig priorityConfig)

Constructs a new Comparator for comparing objects for priority for a given field.

Parameters:

dataTracker - the data tracker

clazz - the Class of the resulting object

fieldName - the fieldName the comparison is for

def - the default Source

defObj - a InterMineObject that came from a data source, not from the destination objectstore, and should be associated with the default source

dbIdsStored - the set of IDs stored in this dataloader run - improves error messages

iw - the IntegrationWriter creating this comparator

source - the main source, as passed to iw.store

skelSource - the skeleton source, as passed to iw.store

priorityConfig - a PriorityConfig object for the target Model

Method Detail

compare

public int compare(InterMineObject o1,
                   InterMineObject o2)

Compares two objects. These objects must both be InterMineObjects.

Specified by:

compare in interface java.util.Comparator<InterMineObject>

Parameters:

o1 - the first object

o2 - the second object

Returns:

a negative integer, zero, or a positive integer as the first argument is less than, equal to, or greater than the second

Throws:

java.lang.ClassCastException - if either of the two objects is not a InterMineObject

java.lang.RuntimeException - if an error occurs in the underlying data tracking objectstore