Package org.intermine.dataloader

Class ObjectStoreDataLoaderTask

  • public class ObjectStoreDataLoaderTask
extends org.apache.tools.ant.Task
    Uses an IntegrationWriter to load data from another ObjectStore.
    Author:
    Andrew Varley, Matthew Wakeling

    • Field Summary

      Fields 
      Modifier and Type Field Description
      protected java.lang.String allSources  
      protected boolean ignoreDuplicates  
      protected java.lang.String integrationWriter  
      protected java.lang.String queryClass  
      protected java.lang.String source  
      protected java.lang.String sourceName  
      protected java.lang.String sourceType  

      • Fields inherited from class org.apache.tools.ant.Task

        description, location, target, taskName, taskType, wrapper

      • Fields inherited from class org.apache.tools.ant.ProjectComponent

        project

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      void execute()
      void setAllSources​(java.lang.String allSources)
      Set the list of data sources present in the project.xml, for the purposes of verifying the priorities properties file.
      void setIgnoreDuplicates​(boolean ignoreDuplicates)
      Set the value of ignoreDuplicates for the IntegrationWriter.
      void setIntegrationWriter​(java.lang.String integrationWriter)
      Set the IntegrationWriter.
      void setQueryClass​(java.lang.String queryClass)
      If the name of a class is set will only load objects of that type.
      void setSource​(java.lang.String source)
      Set the ObjectStore that is the data source.
      void setSourceName​(java.lang.String sourceName)
      Set the source name, as used by primary key priority config.
      void setSourceType​(java.lang.String sourceType)
      Set the source type, as used by primary key priority config.

      • Methods inherited from class org.apache.tools.ant.Task

        getDescription, getLocation, getOwningTarget, getRuntimeConfigurableWrapper, getTaskName, getTaskType, getWrapper, handleErrorFlush, handleErrorOutput, handleFlush, handleInput, handleOutput, init, isInvalid, log, log, maybeConfigure, perform, reconfigure, setDescription, setLocation, setOwningTarget, setRuntimeConfigurableWrapper, setTaskName, setTaskType

      • Methods inherited from class org.apache.tools.ant.ProjectComponent

        getProject, setProject

      • Methods inherited from class java.lang.Object

        clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

    • Field Detail

      • integrationWriter

        protected java.lang.String integrationWriter

      • source

        protected java.lang.String source

      • sourceName

        protected java.lang.String sourceName

      • sourceType

        protected java.lang.String sourceType

      • ignoreDuplicates

        protected boolean ignoreDuplicates

      • queryClass

        protected java.lang.String queryClass

      • allSources

        protected java.lang.String allSources

    • Constructor Detail

      • ObjectStoreDataLoaderTask

        public ObjectStoreDataLoaderTask()

    • Method Detail

      • setIntegrationWriter

        public void setIntegrationWriter​(java.lang.String integrationWriter)
        Set the IntegrationWriter.
        Parameters:
        integrationWriter - the name of the IntegrationWriter

      • setSource

        public void setSource​(java.lang.String source)
        Set the ObjectStore that is the data source.
        Parameters:
        source - the name of the objectstore that is the source

      • setSourceName

        public void setSourceName​(java.lang.String sourceName)
        Set the source name, as used by primary key priority config.
        Parameters:
        sourceName - the name of the data source

      • setSourceType

        public void setSourceType​(java.lang.String sourceType)
        Set the source type, as used by primary key priority config.
        Parameters:
        sourceType - the name of the data source

      • setIgnoreDuplicates

        public void setIgnoreDuplicates​(boolean ignoreDuplicates)
        Set the value of ignoreDuplicates for the IntegrationWriter.
        Parameters:
        ignoreDuplicates - the value of ignoreDuplicates

      • setQueryClass

        public void setQueryClass​(java.lang.String queryClass)
        If the name of a class is set will only load objects of that type.
        Parameters:
        queryClass - the name of a class to load

      • setAllSources

        public void setAllSources​(java.lang.String allSources)
        Set the list of data sources present in the project.xml, for the purposes of verifying the priorities properties file.
        Parameters:
        allSources - a space-separated list of source names

      • execute

        public void execute()
        Overrides:
        execute in class org.apache.tools.ant.Task