Training schedule

Timing: 09:00 - 11:30 AM

09:00 - 09:30: Welcome + what is InterMine?

Approx 30 mins, Leyla

A brief introduction to InterMine, including some basic UI demos. Slides

09:30 - 09:40: Web Service API Introduction

Approx 10 mins, Dani

What is an API and basic examples of accessing them. Slides

09:40 - 10:10: Practical demo: using automatic code generation

Approx 10 mins, Dani

Find an interesting query via the UI, and copy/paste the code to run it in a python script. We’ll also help anyone who has had trouble installing their dependencies.

10:10 - 11:00: More detailed use-cases.

Approx 45 mins, Yo

In-depth walkthrough of the code to create a query, with practical exercises.

11.00 - 11.25: R Overview

Approx 20-25 mins, Dani

Running similar queries to the previous session, in R. Slides

11.25 - 11.30: Conclusions